Browse of TCMCG073C31874 protein

CDS

Accession Number	TCMCG073C31874
gbkey	CDS
Protein Id	XP_010557957.1
Location	join(3889632..3889800,3890033..3890241,3891070..3891207,3891300..3891473,3891892..3891991,3892340..3892458,3892536..3892658,3892755..3892826,3893524..3893616,3893968..3894081,3894164..3894286,3894589..3894774,3894872..3894946,3895518..3895654,3895871..3896005,3896111..3896256,3896344..3896409,3896789..3896895,3897100..3897180,3897265..3897339,3897425..3897526,3897859..3898027,3898118..3898290,3898427..3898510,3898582..3898682,3898931..3899084,3899425..3899499,3899619..3899766,3900074..3900725,3900933..3900993,3901409..3901554,3901628..3901811,3901899..3901997,3902108..3902475,3902578..3902754,3903083..3903179,3903269..3903427,3903512..3903742,3903832..3903915,3904029..3904136)
Gene	LOC104826779
GeneID	104826779
Organism	Tarenaya hassleriana

Protein

Length	1937aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA268022
db_source	XM_010559655.2
Definition	PREDICTED: rRNA biogenesis protein RRP5 isoform X1 [Tarenaya hassleriana]

EGGNOG-MAPPER Annotation

COG_category	A
Description	Protein RRP5 homolog
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko03009        [VIEW IN KEGG]
KEGG_ko	ko:K14792        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0000460        [VIEW IN EMBL-EBI] GO:0000462        [VIEW IN EMBL-EBI] GO:0000466        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005515        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005654        [VIEW IN EMBL-EBI] GO:0005730        [VIEW IN EMBL-EBI] GO:0005886        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006364        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0007275        [VIEW IN EMBL-EBI] GO:0008134        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009553        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016072        [VIEW IN EMBL-EBI] GO:0022613        [VIEW IN EMBL-EBI] GO:0030490        [VIEW IN EMBL-EBI] GO:0030684        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0032040        [VIEW IN EMBL-EBI] GO:0032501        [VIEW IN EMBL-EBI] GO:0032502        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0034470        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0034660        [VIEW IN EMBL-EBI] GO:0042254        [VIEW IN EMBL-EBI] GO:0042274        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043228        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043232        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044085        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0048229        [VIEW IN EMBL-EBI] GO:0048856        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0071944        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI] GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGTTGCGGCGTCGAAGCAATTCCAGAAGAGGAAGCTGGATGGGGCCGCGAAGCATGTTAAGCCGTCGAAGAAAACATTTAAATCCAATAAGATGATGAAGGACGATGGTGTGAGGTCTGAGGCGGTTGCACTGCAGCTTGAAGACGAGATTCCTGATTTTCCTCGAGGTGGAAATATATCTCTTAGTCGAAAAGAACGTGAGAAAATTCGTGCGGAAGTCGATGTTGAGTTTGATGTTGATGAGCATGTTTCTAAGAAGACTAAGAGGGGAAAGGTCAAGAAGAAGAACCCTGCTGATGCAGACGACTTGGGTTCACTTTTTGGGGGTGGTATTTCTGGAAAACTTCCTAGATATGCCAACAAGATTACAAATAAGAATATTTCCCGAGGAATGAAGCTTTGGGGTGTTGTTGCTGAAGTAAACGAGAAGGATCTTATAATCAGTCTTCCTGGAGGCTTACGAGGATTGGTCCGTGCAAAAGAGGCATTGGATTTTTCAGATTATGAGATAAAGGATGATGAAGGTAATCACCTTAGAGCCATTTTCAATGTGGGCCAGCTTGTTCCCTGCATTGTGTTGCAGTTGGATGATGATAAAAAAGAAACTGGGAAAAGGAAAATATGGCTTTCAATGCGACTTTCTTTGTTGCACAAGGGGTTCAGTTTGGATTCCATTCAAGACGGGATGGTGCTATCTGCAAACGTGAAAAGTATTGAGGACCATGGATATATCCTTCATTTTGGATTGCCTTCTATCTCGGGATTTTTACCCAAAAGAAGCCAGGATGGAAGCAGGGAGATCGAAGCAAAAATTGGACAGCTTATGCAGTGTGTTGTTACAAAAGTTGATAGAGACCTTAAAAATGTTCGTCTCTGTTGTGATCCGGATGCTGTGGCGAAGTGTGCGACCAAAGATCTTAGGGGCATGTCCATTGATCTTCTCATGCCAGGCATGATGGTTAATGCTCGTGTGCAATCAGTGCTCGAGAACGGGATTATGTTAGCATTCCTTACATACTTTACCGGCACTGTTGACTTATTCCATCTACAAAATCCTCTCTGCAACAAAAACTGGAAAGATGAGTATAATCAGCATAAGAAGGTTAATGCTAGAATATTGTTTATCGATCCATCGACTAGAGCTGTTGGTTTGACATTGAATCCACATCTTGTCCGTAACAAGCCCCCTCCTCTGCATGTTGCCAGCGGAGGCATATTCGACCAAGCAAAAGTAGTTCGGATTGATAGAGGGTCTGGCCTTCTTTTGGAAATCCCTTCTACCCCTGTATCATCTCCAGCATATGTTAGCGCATCTGATGTAGCCGAAGATGAGGTAAAGAATTTGGAGAAGAAGTTCAAGGAAGGGAGTTGTGTCCGAGTTCGAATCCTTGGCCTTAAGCAGTTGGAGGGGATTGCCATAGGGACTTTGAAGACAAGTGCTTTCGAAGGCCCGGCTTTCATCCACTCAGATGTCAAGCCTGGCATGGTGATGAAGGGAAAAATCATATCTGTGGATACCTTTGGTGCCATTGTGCAATTTCCTGGTGGTCTCAAAGCAATGTGCCCACTTCGGCATATGTCTGAATTTGAAATTGCGAAGCCCCGGAAAAAATTTAAGGTTGGGGCTGAATTGACATTCCGTGCGCTAGGCTGCAAGTCCAAGAGAATAACTGTTACCCACAAGAAAACACTTGTGAAGTCTAAACTTCCAATTCTGACTTCTTATGCTGATGCCACTGAAGGTTTGGTAACACATGGCTGGATAACGAAGATTGAAAAGCATGGTTGCTTTGTTCGATTTTATAATGGGGTTCACGGATTTGCTCCCAGGTTTGAACTTGGATTAGATCCTGGAAGTGATCCTGATTCGGTATTTCATGTCGGCGAGGTTGTCAAATGTAGAGTAACCAGTGCTGTCCATGCTTCACGGAGGATCAACCTTAGTTTTGAGATAAAGCCAGCAAGTGTTTCAGAAGATGATTCGATCAAGTTAGGTAGCATAGTATCAGGAGTGGTTGACACCATCGCTCCCCATGCTGTAATTGTTTGTGTCAAGTCTAAAGGTTACCTGAAGGGTACAATTTCTATTGAACATTTAGCCGATCACCATGAGCACGCAAAATTGATGAAGTCAGTCGTGAGACCTGGATATGAGTTTAAAAAGTTATTGGTACTAGACATTGAGGGAAAAAACTTGGTTCTCTCCTCAAAACATTCTCTCTTAAAGTCAGCAGAAGAGATTCCTTCAAATGCTAGCCAGCTTCAACCAAACTCAGTAATCCATGGTTACATTTGTAACTTGATTGAAAGCGGCTGCTTTATCCGATTTCTTGGTCGGTTGACAGGTTTTGCTCCACGAAGCAAGGCAATGGACGAAACTAAAGGAGGTCTATCGGAAGCCTTCTACATTGGACAATCCGTTCGAGCTAATATAATTGATATCAATCAAGAAGAGGGCAGGATAACTCTTTCTTTGAAGCAATCATCTTGCTCTTCTGTAGATGCGTCTTTCATTCAAGAGTACTTCCTAATGGATGAAAAGATAGCCAACCTACAATCATCTGACACCATAGGAACTGAGTTTGGTTGGGTTGAACAATTTACTATCGGGAGTTTGGTTAAGGGAACTGCGCAGGAGAAAAATGACCTTGGAGTTGTTGTCAAATTTGAGAATTTTGATGATGTCCTTGGTTGTGTACCTCACTATCACTTGGGTGGAGCTGCTGTGGAATGTGGTTCTGTTCTCCAAGCGGTTGTACTTGATTTCTCAAGGGCTGAAAGGCTGGTTGACCTGTCTTTGAGATCTGATTTCACAACTAACTCCGCTAAAGAAGCATCTAGCATTCAATTGAAGAAGGTTTCTCTTGAAAGATATATTCCAGCTAAACGTAAAAGAGGAATCTCAAAGGAGCTAGAGCTTCACCAGAGGGTCAATGCTGTTGTAGAGATGGTGAAGGAGCACTACTTGGTTTTGTCGATTCCTGAATATGATTACACTATCGGATACGCATCAGTGTCAGACTATAATACGCAGAACTTTCCTACGAGACGATTTTCCACTGGACAAAGTGTCGTTGCTTCTGTTGTGGCTCTTCCAAACCCTTTGAGTTCAGGCCGGTTGCTTCTGCTTCTGGATTCAGTTACTGAGGCTTCCGAGACATCCCGGTCAAAGAAGGCCAAAAAGAAGTCCAACTATGAAGTGGGATCTGTTATCCGGGCTGAGATTACTGAAATCAAGCCTCTTGAACTTAGAGTAAATTTTGGCTCTGATTTGCAGGGAAGAATCCATATAACAGAGGTAAATGATATAAATACTTGTGAAGAACCTTTTGCTAACTTCAAGGTTGGACAATCATTGTCTGCGAGGATTGTTGCAAAGCCGTGTCGATCTAACACTAAAAGGGGTTACCTATGGGAGCTCTCCATCAAACCTGCACTGCTTAGAGATTCCGGCGATTTGAATGACATGCAAATCAATGAGCAGCTCGACTTTTCGGCTGGACAATCTGTCAGTGGGTATGTCTACAAAGTAGACGTTGAATGGGTTTGGCTGGCAGTATCCCGGAATGTGAAGGCTCGCTTATATATTTTAGATACTACTTGTGAGCCTCATGAACTCAAAGAGTTCCAGAGACGGTTCCACCCCGGGAAAGCTGTTTCAGGCTATGTGTTAAGTTATAATAAAGAGAAGAAATCGTTACGGTTGGTTCAGCGTCCAGTGCTTGATGCTTCCCAATGCACTGTAGAGAATGGAAGTGGCAAACTAGATGCATTAGGTAGTAACATTCATGGTGAAGATGCCAGTCTTTATATATATGAAGGAGACATTTTGGGTGGAAGAATTTCCAAGATTCTTCCTGGTGTCGGTGGACTTGTTGTACAAATTGGTCCGCACACTTATGGTAAAGTTCATTTTACTGAACTGAAAGATTCGTGGGTGTCTGATCCACTTGATGACTACTGCGAAGGCCAGTTTGTCAAATGCAAGGTCATAGAAATCAGCCACTCTGTTAAAGGGACGTTGCATATTGATCTGTCACTGCGGACATCATTAGATGGCATGGGTTCAGGCCAAGATTCAGAAGCATTGAATAACATTGATAGTGCTTGCAGACGTATAGAGAGGATTGATGATCTTTCTCCTGATATGGTCGTTCAGGGTTATGTTAAAAATATTATGGCAAAAGGTTGTTTTATTGTGCTTTCTCGGAAGCTTGAGGCAAAAATTCTTCTCTCTAATTTGAGTGATGAGTTTGTTGAGAAACCTGAAAAGGAGTTCCCCATAGGAAAGCCCGTTATTGGCAGGGTGCTTACTGTGGAGCCGTTAACCAAGCGGATCGAAGTTAGTCTGAAGTCAGCAAATGCTGGTAGAGCACGGAAATCTGAAGTTTATGACTTCACGAAGTTCTCCATTGGAGACAGGATATCCGGGAGAATTAAACGTGTGGAGCCATATGGATTATTCATTGTGTTAGATCAGACAAACATGGTTGGATTATGTCACAAGTCAGAGCTTTCAGATGAACGTGTTGACAACATACAAGCCACGTATAAAGCTGGAGAGAGGGTCACTGTAAAAATTCTGAAACTGGATCAGGAAAAGCATCATATATCTCTTGGAATGAAGAGTTCTTACTTTGCAAGTGACGATGATGACAAGATGCAGCCAGCTTCTAGTGAAATGCCTGGTAAAGCCAGCATGCAATGTGATGACATCAGTGATACCGATTCAGAAGCTTCTGCGGAAATTCGTGAGGAAATAACCATCGAAAATGGAACATCAATGGTTCTTTCTCAAGTGGAGTCAAGGGCCTCTGTTCCTCCACTAGAGGTCGACCTTGATGAAATAGAGCAGTACGACTTTGCTGTGGATCAGAGCAAAGTGCAACAAGAGGAAGAAGACAAAAAAGATGAAAAGAACAAGAGAAGGGCTAAGAAGAAAGCCAAGGAGGAAAGAGAGAAAGAAATACAAGCTGCTGAGGAAAGATTACTGGAGAAGAGTGTGCCTGCTAGTGCAGATGACTTTGAGAAGTTGGTTAGAAGCTCTCCCAGTAGCAGTTTTATCTGGATAAAATATATGGCATTCACGCTTTCGTTGGCTGATGTTGAGAAAGCCCGGTCTATCGCTGAGAGGGCCTTGAGGACAATAAACATTCGCGAAGAGGAAGAGAAGCTAAATGTCTGGGTTGCTTACTTCAACTTGGAAAATGAACATGGAAATCCTCCACAGGATGCTGTTAAGAAAGTGTTTGAAAGAGCGCTTCAGTACTGTGATCAGAAAAAGGTCTATCTGGCACTCTTGGGCATGTACGATAGAACAGAGCAGAACGAGTTGGCTGATGAACTTCTGGACAAGAAAATGATCAAGAAGTTCAAGCACTCATGCAAGGTTTGGCTAAGGAAGGTACAGCAGCTTCTAAAGGGAAATGGGGAAGGCATCCAGTCCCTTGTTACCCGGGCGTTAGAGTGTCTTCCCCGCCACAAGCACATCAAATTCATATCGCAGACCGCTATTCGCGAGTTCAAATGTGGAGTACCCGATAGAGGCCGATCACTTTTTGAAGGCGTCCTTAGAGAATACCCGAAGAGAACAGACTTATGGAGTGTATATCTTGACCAAGAAATTAGGCTTGGAGATGTTGATGTGACTAGGTCTCTGTTTGAGAGGGCTATCAGCTTGAGTCTTCCTCCGAAAAAGATGAAGTTTTTGTTCAAGAAGTACCTTGAGTACGAGAAATCTCTTGGCGACGACGAGAGGGCTGAGGATGTGAAACGAAAGGCCATGGAGTACGTCGAGAGTACGCTGGCTTAA

Protein:   MVAASKQFQKRKLDGAAKHVKPSKKTFKSNKMMKDDGVRSEAVALQLEDEIPDFPRGGNISLSRKEREKIRAEVDVEFDVDEHVSKKTKRGKVKKKNPADADDLGSLFGGGISGKLPRYANKITNKNISRGMKLWGVVAEVNEKDLIISLPGGLRGLVRAKEALDFSDYEIKDDEGNHLRAIFNVGQLVPCIVLQLDDDKKETGKRKIWLSMRLSLLHKGFSLDSIQDGMVLSANVKSIEDHGYILHFGLPSISGFLPKRSQDGSREIEAKIGQLMQCVVTKVDRDLKNVRLCCDPDAVAKCATKDLRGMSIDLLMPGMMVNARVQSVLENGIMLAFLTYFTGTVDLFHLQNPLCNKNWKDEYNQHKKVNARILFIDPSTRAVGLTLNPHLVRNKPPPLHVASGGIFDQAKVVRIDRGSGLLLEIPSTPVSSPAYVSASDVAEDEVKNLEKKFKEGSCVRVRILGLKQLEGIAIGTLKTSAFEGPAFIHSDVKPGMVMKGKIISVDTFGAIVQFPGGLKAMCPLRHMSEFEIAKPRKKFKVGAELTFRALGCKSKRITVTHKKTLVKSKLPILTSYADATEGLVTHGWITKIEKHGCFVRFYNGVHGFAPRFELGLDPGSDPDSVFHVGEVVKCRVTSAVHASRRINLSFEIKPASVSEDDSIKLGSIVSGVVDTIAPHAVIVCVKSKGYLKGTISIEHLADHHEHAKLMKSVVRPGYEFKKLLVLDIEGKNLVLSSKHSLLKSAEEIPSNASQLQPNSVIHGYICNLIESGCFIRFLGRLTGFAPRSKAMDETKGGLSEAFYIGQSVRANIIDINQEEGRITLSLKQSSCSSVDASFIQEYFLMDEKIANLQSSDTIGTEFGWVEQFTIGSLVKGTAQEKNDLGVVVKFENFDDVLGCVPHYHLGGAAVECGSVLQAVVLDFSRAERLVDLSLRSDFTTNSAKEASSIQLKKVSLERYIPAKRKRGISKELELHQRVNAVVEMVKEHYLVLSIPEYDYTIGYASVSDYNTQNFPTRRFSTGQSVVASVVALPNPLSSGRLLLLLDSVTEASETSRSKKAKKKSNYEVGSVIRAEITEIKPLELRVNFGSDLQGRIHITEVNDINTCEEPFANFKVGQSLSARIVAKPCRSNTKRGYLWELSIKPALLRDSGDLNDMQINEQLDFSAGQSVSGYVYKVDVEWVWLAVSRNVKARLYILDTTCEPHELKEFQRRFHPGKAVSGYVLSYNKEKKSLRLVQRPVLDASQCTVENGSGKLDALGSNIHGEDASLYIYEGDILGGRISKILPGVGGLVVQIGPHTYGKVHFTELKDSWVSDPLDDYCEGQFVKCKVIEISHSVKGTLHIDLSLRTSLDGMGSGQDSEALNNIDSACRRIERIDDLSPDMVVQGYVKNIMAKGCFIVLSRKLEAKILLSNLSDEFVEKPEKEFPIGKPVIGRVLTVEPLTKRIEVSLKSANAGRARKSEVYDFTKFSIGDRISGRIKRVEPYGLFIVLDQTNMVGLCHKSELSDERVDNIQATYKAGERVTVKILKLDQEKHHISLGMKSSYFASDDDDKMQPASSEMPGKASMQCDDISDTDSEASAEIREEITIENGTSMVLSQVESRASVPPLEVDLDEIEQYDFAVDQSKVQQEEEDKKDEKNKRRAKKKAKEEREKEIQAAEERLLEKSVPASADDFEKLVRSSPSSSFIWIKYMAFTLSLADVEKARSIAERALRTINIREEEEKLNVWVAYFNLENEHGNPPQDAVKKVFERALQYCDQKKVYLALLGMYDRTEQNELADELLDKKMIKKFKHSCKVWLRKVQQLLKGNGEGIQSLVTRALECLPRHKHIKFISQTAIREFKCGVPDRGRSLFEGVLREYPKRTDLWSVYLDQEIRLGDVDVTRSLFERAISLSLPPKKMKFLFKKYLEYEKSLGDDERAEDVKRKAMEYVESTLA